mRNA vaccine co-design
Codon sequences that fold stably and express well, under manufacturing constraints (placeholder)
+7 −0 README.md 新增 查看文件
| @@ -0,0 +1,7 @@ | ||
| 1 | +# mRNA vaccine co-design | |
| 2 | + | |
| 3 | +> **Placeholder.** This problem is here so the problem panel can be tried out. Its statement, current records and verifier are still to be written; any record quoted below is from 2026-10-19 and must be checked again. | |
| 4 | + | |
| 5 | +## Problem | |
| 6 | + | |
| 7 | +Extend LinearDesign (Nature, 2023): choose synonymous codons for a target protein to lower minimum free energy while codon adaptation stays high, and avoid restriction sites, long double-stranded regions and extreme GC windows. The translation is checked exactly; folding is scored with ViennaRNA. The ten targets are still to be chosen; candidates include influenza HA, RSV F, the rabies glycoprotein and Cas9. | |