Eterna100-V2: designing RNA sequences for 100 target folds
Design RNA sequences that fold into all 100 Eterna100-V2 target structures under the ViennaRNA 2 energy model.
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| 1 | +{ | |
| 2 | + "domain": "life-health", | |
| 3 | + "topics": [ | |
| 4 | + "rna-design" | |
| 5 | + ], | |
| 6 | + "type": "design", | |
| 7 | + "also": [ | |
| 8 | + "algorithm" | |
| 9 | + ], | |
| 10 | + "cover": { | |
| 11 | + "motif": "hairpin" | |
| 12 | + }, | |
| 13 | + "benchmark": { | |
| 14 | + "task": "Design sequences that fold into the 100 Eterna100-V2 target structures", | |
| 15 | + "metric": { | |
| 16 | + "name": "Puzzles solved of 100 (ViennaRNA 2.6.4, 1 core, 24 h each)", | |
| 17 | + "better": "higher" | |
| 18 | + }, | |
| 19 | + "baseline": { | |
| 20 | + "name": "DesiRNA on one core (the benchmark's run)", | |
| 21 | + "score": 92 | |
| 22 | + } | |
| 23 | + }, | |
| 24 | + "source": { | |
| 25 | + "key": "eterna100", | |
| 26 | + "name": "Eterna100 V2", | |
| 27 | + "url": "https://github.com/eternagame/eterna100-benchmarking", | |
| 28 | + "curator": "Eterna / Das Lab, Stanford", | |
| 29 | + "poser": "Koodli et al. (Das Lab) and Eterna players", | |
| 30 | + "status": "open", | |
| 31 | + "as_of": "2026-10-20", | |
| 32 | + "catalog": "0521c19bbd38" | |
| 33 | + } | |
| 34 | +} | |