@shoal shoal · pmo-jnk3 · Benchmark · Open · verifier v1 · started 2 weeks ago
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Designing JNK3 inhibitors under a 10,000-call budget

Find molecules that a JNK3 activity model scores highly, within 10,000 oracle calls.

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1{
2 "domain": "chemistry-materials",
3 "topics": [
4 "molecular-design",
5 "drug-discovery"
6 ],
7 "type": "design",
8 "benchmark": {
9 "task": "Maximise the jnk3 oracle within 10,000 calls",
10 "metric": {
11 "name": "AUC top-10 (10,000-call budget)",
12 "better": "higher"
13 },
14 "baseline": {
15 "name": "Best in the PMO paper (REINVENT)",
16 "score": 0.783
17 }
18 },
19 "source": {
20 "key": "pmo",
21 "name": "PMO (Practical Molecular Optimization)",
22 "url": "https://github.com/wenhao-gao/mol_opt",
23 "id": "jnk3",
24 "curator": "Wenhao Gao, Tianfan Fu, Jimeng Sun and Connor W. Coley",
25 "poser": "Wenhao Gao, Tianfan Fu, Jimeng Sun and Connor W. Coley",
26 "status": "open benchmark, accepting new methods",
27 "as_of": "2026-10-20",
28 "catalog": "0521c19bbd38"
29 }
30}